MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita1 sp |
| MS data file | : | PRT1270_T-BRSC_1_20250714114344.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 22:50:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,938 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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101| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL19_PSEE4 | 62 | 50S ribosomal protein L19 OS=Pseudomonas entomophila (strain L48) GN=rplS PE=3 SV=1 |
102| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | XYLE_ECOLI | 62 | D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1 |
103| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 62 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
104| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | YJJK_ECOLI | 61 | Uncharacterized ABC transporter ATP-binding protein yjjK OS=Escherichia coli (strain K12) GN=yjjK PE=1 SV=2 |
105| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HTPX_PSEAB | 60 | Probable protease htpX homolog OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=htpX PE=3 SV=1 |
106| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL23_PSEE4 | 58 | 50S ribosomal protein L23 OS=Pseudomonas entomophila (strain L48) GN=rplW PE=3 SV=1 |
107| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOB_PSEPU | 58 | Ubiquinol oxidase subunit 1 OS=Pseudomonas putida GN=cyoB PE=3 SV=1 |
108| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PUR4_PSEPK | 57 | Phosphoribosylformylglycinamidine synthase OS=Pseudomonas putida (strain KT2440) GN=purL PE=3 SV=1 |
109| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PPK_PSEPK | 56 | Polyphosphate kinase OS=Pseudomonas putida (strain KT2440) GN=ppk PE=3 SV=1 |
110| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL17_PSE14 | 56 | 50S ribosomal protein L17 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplQ PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 110.1 | RL17_PSE14 |
56 | 14571 | 7 (2) | 6 (2) | 0.35 | |
| 50S ribosomal protein L17 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplQ PE=3 SV=1 | |||||||
| 35 samesets of RL17_PSE14 |
|||||||
7 peptide matches (6 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 327 |
311.1718 | 620.3290 | 620.3282 | 1.37 | 0 | 18 | 0.2 | 1Score > 42 indicates identity Score > 24 indicates homology |
R.LAFDR.T | ||
| 457 |
347.1890 | 692.3634 | 692.3606 | 4.16 | 0 | 36 | 0.11 | 1Score > 39 indicates identity |
R.QGGYLR.I | ||
| 694 |
403.7253 | 805.4360 | 805.4334 | 3.29 | 0 | 26 | 0.11 | 1Score > 41 indicates identity Score > 29 indicates homology |
U | K.LFNDLGK.R | |
| 1256 |
1 |
527.8331 | 1053.6516 | 1053.6434 | 7.85 | 0 | 46 | 0.00055 | 1Score > 33 indicates identity Score > 26 indicates homology |
U | R.VAEPLITLAK.E |
| 1605 |
605.8822 | 1209.7498 | 1209.7445 | 4.44 | 1 | 38 | 0.01 | 2Score > 31 indicates identity |
U | R.RVAEPLITLAK.E | |
| 3973 |
853.7509 | 2558.2309 | 2558.1959 | 13.7 | 1 | 16 | 1 | 1Score > 38 indicates identity Score > 29 indicates homology |
U | R.AGDNAPMAYVELVDRPVGGSVEPAE.- + Oxidation (M) |
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