MASCOT Search Results

Search metadata
User : Jennifer
E-mail : [email protected]
Search title : Rita1
MS data file : PRT1270_T-BRSC_1_20250714114344.mgf
Database : P-putida 20180924 (5,556 sequences; 1,892,173 residues)
Timestamp : 12 Aug 2025 at 22:47:09 GMT
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : GluC_Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Deamidated (NQ), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 20 ppm
Fragment mass tolerance : ± 0.1 Da
Max missed cleavages : 1
Instrument type : ESI-FTICR
Number of queries : 4,938

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 19 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Protein families 71–80 (out of 313)


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+71

Accession Score Description
1 Q88P92_PSEPK 201 Toluene tolerance ABC transporter, periplasmic substrate-binding protein OS=Pseudomonas putida (strain KT2440) GN=ttg2C PE=4 SV=1

+72

Accession Score Description
1 Q88KI7_PSEPK 201 DNA-binding protein HU-beta OS=Pseudomonas putida (strain KT2440) GN=hupB PE=3 SV=1

+73

Accession Score Description
1 Q88NH1_PSEPK 199 Lipoprotein, putative OS=Pseudomonas putida (strain KT2440) GN=PP_1238 PE=4 SV=1

+74

Accession Score Description
1 DAVT_PSEPK 197 5-aminovalerate aminotransferase DavT OS=Pseudomonas putida (strain KT2440) GN=davT PE=1 SV=1

+75

Accession Score Description
1 Q88NM8_PSEPK 193 Ribonucleoside-diphosphate reductase OS=Pseudomonas putida (strain KT2440) GN=nrdA PE=3 SV=1

+76

Accession Score Description
1 Q88M60_PSEPK 192 Peptidyl-prolyl cis-trans isomerase OS=Pseudomonas putida (strain KT2440) GN=fklB-2 PE=4 SV=1

+77

Accession Score Description
1 Q88N72_PSEPK 191 Cell division protein ftsA OS=Pseudomonas putida (strain KT2440) GN=ftsA PE=3 SV=1

+78

Accession Score Description
1 IF2_PSEPK 189 Translation initiation factor IF-2 OS=Pseudomonas putida (strain KT2440) GN=infB PE=3 SV=1

+79

Accession Score Description
1 Q88K44_PSEPK 186 Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_2448 PE=4 SV=1

+80

Accession Score Description
1 Q88KI6_PSEPK 186 Peptidylprolyl isomerase OS=Pseudomonas putida (strain KT2440) GN=PP_2304 PE=4 SV=1
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