MASCOT Search Results

Search metadata
User : Jennifer
E-mail : [email protected]
Search title : 4
MS data file : PRT1245_Other_P1_B12.mgf
Database : S-cerevisiae-S288C 20191206 (6,886 sequences; 3,133,934 residues)
Timestamp : 24 Jun 2025 at 21:22:18 GMT
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Deamidated (NQ), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 20 ppm
Fragment mass tolerance : ± 0.1 Da
Max missed cleavages : 1
Instrument type : ESI-FTICR
Number of queries : 4,772

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 21 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Unassigned peptides, 601–700 (out of 4709)


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Peptide matches not assigned to protein families (no details means no match)

Query Observed Mr(expt) Mr(calc) ppm  M Score Expect Rank Peptide
Query Observed Mr(expt) Mr(calc) ppm  M Score Expect Rank Peptide
2525 606.7896 1211.5646 1211.5822 -14.5 1 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
KDSIYANWSK + Deamidated (NQ)
2844 749.3752 1496.7358 1496.7147 14.1 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
LDSEFQPLSSAFR + Deamidated (NQ)
3022 534.9493 1601.8261 1601.8382 -7.55 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
STVPIIIRCCIDR
2252 567.2847 1132.5548 1132.5335 18.8 0 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
MEAHNQFLK + Oxidation (M)
2602 643.8290 1285.6434 1285.6374 4.68 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
INGNGKNNIDAR + Deamidated (NQ)
3681 684.9840 2051.9302 2051.9436 -6.55 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
EAVVDDGSENAFGIPEFTR
1345 874.4278 873.4205 873.4192 1.55 0 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
NNQIEEK
1616 483.7361 965.4576 965.4753 -18.3 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
IATRGAFAC
2561 625.3345 1248.6544 1248.6350 15.6 1 0 0.94 +1Score > 22 indicates identity
Score > 13 indicates homology
ELNLGKDEFGK
1299 854.4123 853.4050 853.4181 -15.4 0 0 3.3 +1Score > 18 indicates identity VATGYSEK
3506 976.4488 1950.8830 1950.9026 -10.0 1 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
LTASPDNLASMMSKDQNK + Deamidated (NQ)
1873 520.7551 1039.4956 1039.5008 -4.96 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NEGIMGLYK + Oxidation (M)
3234 584.2688 1749.7846 1749.7614 13.2 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
ANINDLNEVLDQCTK + 4 Deamidated (NQ)
1334 867.4229 866.4156 866.4021 15.6 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
INSEQFK + 2 Deamidated (NQ)
2763 723.8716 1445.7286 1445.7085 13.9 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
SHGAVLPSYCSLR
1615 483.7354 965.4562 965.4753 -19.7 1 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
IATRGAFAC
2256 567.7828 1133.5510 1133.5313 17.5 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
QNTSQNNSIK + Deamidated (NQ)
2872 757.9145 1513.8144 1513.8075 4.60 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
KPTMIKLQFHNR + 2 Deamidated (NQ)
3047 810.9093 1619.8040 1619.8042 -0.11 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
ALDQSISKLQSWDK + 2 Deamidated (NQ)
3801 701.3392 2100.9958 2101.0368 -19.5 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
STFREQIIYPDSIEQFK + Deamidated (NQ)
4388 920.4587 2758.3543 2758.3450 3.37 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
VTDFQFIQDTTKSLASVYLHSSNR + 2 Deamidated (NQ)
2726 710.8868 1419.7590 1419.7544 3.27 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NLAVVQTPMFRK + Deamidated (NQ); Oxidation (M)
895 579.3149 578.3076 578.3098 -3.71 0 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
AMITK + Oxidation (M)
1106 754.3371 753.3298 753.3268 3.98 0 0 2.4 +1Score > 17 indicates identity NWFCK
2203 1119.6149 1118.6076 1118.6118 -3.71 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
IMVIGGKNSGK + Oxidation (M)
2853 752.8713 1503.7280 1503.7425 -9.64 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
SPTGIVLMNMGGPSK + Oxidation (M)
3097 830.4290 1658.8434 1658.8416 1.10 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
DWIQNGRPNLFGLK + 2 Deamidated (NQ)
3992 735.3275 2202.9607 2202.9813 -9.38 0 0 3.4 +1Score > 18 indicates identity GANIASFVMVADAMLDQGDVF + Deamidated (NQ); 2 Oxidation (M)
2494 596.8206 1191.6266 1191.6288 -1.83 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
GVLFYGPPGTGK
976 328.1745 654.3344 654.3449 -16.0 0 0 2.8 +1Score > 17 indicates identity LTQHR + Deamidated (NQ)
1085 742.3368 741.3295 741.3333 -5.15 0 0 2.4 +1Score > 17 indicates identity GEFFNK + Deamidated (NQ)
1164 783.3701 782.3628 782.3745 -14.9 0 0 3.8 +1Score > 19 indicates identity MSNFIR + Oxidation (M)
2154 553.2949 1104.5752 1104.5788 -3.23 1 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
QRSFNANLR
2250 1133.5479 1132.5406 1132.5183 19.8 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
MSAPEAQQQK + Oxidation (M)
2660 672.8266 1343.6386 1343.6510 -9.18 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
DGEWLYHISPK
2950 521.6019 1561.7839 1561.7997 -10.1 0 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
VLQTMSFLMNHLI + Oxidation (M)
3182 574.9203 1721.7391 1721.7340 2.96 1 0 3.3 +1Score > 18 indicates identity STPQDTNVNSQSRER + 4 Deamidated (NQ)
2734 715.8345 1429.6544 1429.6547 -0.19 0 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
NYVMQYIQENK + Deamidated (NQ)
4393 922.4741 2764.4005 2764.3483 18.9 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
IKSFGDSVPYIEEALQVYSTEFDK
2072 544.7736 1087.5326 1087.5397 -6.46 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
LNGQLNLEGK + 3 Deamidated (NQ)
4135 775.7155 2324.1247 2324.1610 -15.6 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
TVAGFSNVELPQCIIPSSYIK + 2 Deamidated (NQ)
2021 1077.5281 1076.5208 1076.5210 -0.17 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NSSQRSQLR + 2 Deamidated (NQ)
2783 728.3552 1454.6958 1454.7041 -5.69 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
GINELLGFNSSFR + 2 Deamidated (NQ)
3417 937.4588 1872.9030 1872.9073 -2.28 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
LINRTNCPTQIMNPAK + 3 Deamidated (NQ)
2951 521.6026 1561.7860 1561.7997 -8.76 0 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
VLQTMSFLMNHLI + Oxidation (M)
2150 553.2875 1104.5604 1104.5597 0.67 0 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
LLNNLSMER + Oxidation (M)
1035 347.1678 692.3210 692.3275 -9.38 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
MKQGGR + Deamidated (NQ); Oxidation (M)
2685 687.3422 1372.6698 1372.6582 8.46 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NIEASVQPSRDR + 2 Deamidated (NQ)
3203 868.4240 1734.8334 1734.8617 -16.3 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
ERNYIVAFIFGNYK + 2 Deamidated (NQ)
2874 758.8688 1515.7230 1515.7279 -3.20 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
APEIMLSYQGYTK + Oxidation (M)
3115 836.9404 1671.8662 1671.8355 18.4 0 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
EAVHILLDEIDDYK
3149 847.3816 1692.7486 1692.7559 -4.31 1 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
ETSNKQTACPICQR + Deamidated (NQ)
3680 1026.5051 2050.9956 2051.0058 -4.96 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
NQYGLLKQTQELEETQK + 2 Deamidated (NQ)
1754 504.2505 1006.4864 1006.4832 3.23 1 0 1 +1Score > 23 indicates identity
Score > 13 indicates homology
NGGKGGENFK
2466 591.8113 1181.6080 1181.5863 18.4 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
MYIQLEGRR + Deamidated (NQ); Oxidation (M)
3963 1091.9952 2181.9758 2181.9437 14.7 1 0 1 +1Score > 20 indicates identity
Score > 13 indicates homology
ENDIFELKDVDDQNQTQK + 4 Deamidated (NQ)
1473 461.7551 921.4956 921.4920 4.00 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NSFSNIIK
2095 547.7654 1093.5162 1093.5186 -2.14 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
SQVSQNRMK + Deamidated (NQ); Oxidation (M)
4259 821.3983 2461.1731 2461.1319 16.7 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
SIQDLTNSMLQFSDPLTTYNR + 2 Deamidated (NQ); Oxidation (M)
1445 456.2336 910.4526 910.4509 1.97 0 0 4.9 +1Score > 20 indicates identity GQNPVDGPK
3221 872.4072 1742.7998 1742.7999 -0.028 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
FSVNSEEDLNFSEVK
1151 778.3754 777.3681 777.3552 16.7 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
GQGGMRR + Deamidated (NQ); Oxidation (M)
2183 557.7585 1113.5024 1113.5012 1.12 1 0 4.3 +1Score > 19 indicates identity YIDDGMQKK + Deamidated (NQ); Oxidation (M)
4277 832.4216 2494.2430 2494.2486 -2.24 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NEVTCSITGDNPIHKINNGLGLK + Deamidated (NQ)
2467 591.8118 1181.6090 1181.5863 19.3 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
MYIQLEGRR + Deamidated (NQ); Oxidation (M)
4138 777.3703 2329.0891 2329.1260 -15.8 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
MSDNLLSLENPVVPSHYELR + Deamidated (NQ); Oxidation (M)
4369 904.4234 2710.2484 2710.2288 7.23 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
EDAMIAQESMNNYLLMGHLLQVR + 3 Deamidated (NQ); 2 Oxidation (M)
1170 784.3896 783.3823 783.3949 -16.0 1 0 3 +1Score > 17 indicates identity CKYVSK
4004 739.3283 2214.9631 2214.9742 -5.00 1 0 3.8 +1Score > 18 indicates identity VQLCTLMNIKSGGCSEDCK + Oxidation (M)
2583 636.3024 1270.5902 1270.5789 8.93 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
NGQASAPRPNQK + 4 Deamidated (NQ)
2440 1176.5566 1175.5493 1175.5459 2.94 0 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
GVEAGDFEQPK
2549 618.7977 1235.5808 1235.5703 8.53 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
NAAMEVQEAKK + 2 Deamidated (NQ); Oxidation (M)
2562 625.3350 1248.6554 1248.6350 16.4 1 0 1 +1Score > 22 indicates identity
Score > 13 indicates homology
ELNLGKDEFGK
3235 875.9709 1749.9272 1749.9108 9.38 1 0 1 +1Score > 21 indicates identity
Score > 13 indicates homology
SLLTSQLSSSTEKVNR + Deamidated (NQ)
1 300.2086 299.2013
2 301.1434 300.1361
3 301.1436 300.1363
4 301.1436 300.1363
5 301.1437 300.1364
6 301.1439 300.1366
7 301.1440 300.1367
8 301.1444 300.1371
9 301.2210 300.2137
10 303.8863 302.8790
11 303.8866 302.8793
12 303.8870 302.8797
13 303.8872 302.8799
14 303.8873 302.8800
15 305.0122 304.0049
16 305.1735 304.1662
17 305.1745 304.1672
18 305.1748 304.1675
19 305.1750 304.1677
20 305.1750 304.1677
21 305.1752 304.1679
22 305.1754 304.1681
23 305.1756 304.1683
24 305.1758 304.1685
25 305.1759 304.1686
26 305.1760 304.1687
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